I don't think I'm doing my pathlength correction right
In [2]:
from PlateAnalysis_b import PlateDataset
Plate = PlateDataset('20191202_KPi_Triton.CSV','20191202_pathlength_kpi_Triton.CSV')
Plate_corr = PlateDataset('20191202_KPi_Triton.CSV','20191202_pathlength_kpi_Triton.CSV',True)
CompoundMap = dict(zip(range(1,25),['Lauric Acid']*6 + \
['Arachadionic Acid']*6 + \
['Palmitic Acid']*6 + \
['4-Phenylimidazole']*6))
for i in range(1,25):
print(i,': Not Corrected '+ CompoundMap[i])
NormalizedTraces, DifferenceSpec, DiffDiff = Plate.AnalysisPipeline_1(i)
Plate.PlotTrace(NormalizedTraces)
Plate.PlotTrace(DifferenceSpec)
print(i,' :Corrected '+ CompoundMap[i])
NormalizedTraces, DifferenceSpec, DiffDiff = Plate_corr.AnalysisPipeline_1(i)
Plate_corr.PlotTrace(NormalizedTraces)
Plate_corr.PlotTrace(DifferenceSpec)
1 : Not Corrected Lauric Acid
1 :Corrected Lauric Acid
2 : Not Corrected Lauric Acid
2 :Corrected Lauric Acid
3 : Not Corrected Lauric Acid
3 :Corrected Lauric Acid
4 : Not Corrected Lauric Acid
4 :Corrected Lauric Acid
5 : Not Corrected Lauric Acid
5 :Corrected Lauric Acid
6 : Not Corrected Lauric Acid
6 :Corrected Lauric Acid
7 : Not Corrected Arachadionic Acid
7 :Corrected Arachadionic Acid
8 : Not Corrected Arachadionic Acid
8 :Corrected Arachadionic Acid
9 : Not Corrected Arachadionic Acid
9 :Corrected Arachadionic Acid
10 : Not Corrected Arachadionic Acid
10 :Corrected Arachadionic Acid
11 : Not Corrected Arachadionic Acid
11 :Corrected Arachadionic Acid
12 : Not Corrected Arachadionic Acid
12 :Corrected Arachadionic Acid
13 : Not Corrected Palmitic Acid
13 :Corrected Palmitic Acid
14 : Not Corrected Palmitic Acid
14 :Corrected Palmitic Acid
15 : Not Corrected Palmitic Acid
15 :Corrected Palmitic Acid
16 : Not Corrected Palmitic Acid
16 :Corrected Palmitic Acid
17 : Not Corrected Palmitic Acid
17 :Corrected Palmitic Acid
18 : Not Corrected Palmitic Acid
18 :Corrected Palmitic Acid
19 : Not Corrected 4-Phenylimidazole
19 :Corrected 4-Phenylimidazole
20 : Not Corrected 4-Phenylimidazole
20 :Corrected 4-Phenylimidazole
21 : Not Corrected 4-Phenylimidazole
21 :Corrected 4-Phenylimidazole
22 : Not Corrected 4-Phenylimidazole
22 :Corrected 4-Phenylimidazole
23 : Not Corrected 4-Phenylimidazole
23 :Corrected 4-Phenylimidazole
24 : Not Corrected 4-Phenylimidazole
24 :Corrected 4-Phenylimidazole